Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGTACAGCCGAGCCAAGCAGA
((((.(((.((((((((((((&))))..)))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142554
GeneSymbolTRMT1
Binding site951,976
Score0.923
Seed0
Au0.397
Energy-21.8
Binding len25
Me-9.113
Phylopstem3.814281785714286
Phylopflank3.3691699699999997
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end8
PositionCDS
2D Structure