Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGACAGCCACCTCACAGCCCTCAGATGACAGAAGCAGCAGCAC
.(((.(((((((((((.((((&.)))).))))))..............))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142565
GeneSymbolCPSF7
Binding site218,263
Score0.846
Seed0
Au0.397
Energy-22.6
Binding len36
Me-7.912
Phylopstem0.8295659199999997
Phylopflank1.8071729874999998
Longest consecutive pairings6
Position of longest consecutive pairings24
Pairings in 3prime end7
PositionCDS
2D Structure