Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTATAGTAACTGAAGCTGCAGCTGTAAG
((((((((((((((....(((&.)))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142568
GeneSymbolBBX
Binding site6234,6262
Score1.0
Seed1
Au0.662
Energy-23.9
Binding len21
Me-4.906
Phylopstem2.0270879285714285
Phylopflank2.7601594537499996
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure