Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACTTGGGATCACAGTTGCGT
.((((((((.((((.((((((&)).)))).)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142573
GeneSymbolIMPDH1
Binding site2331,2353
Score0.846
Seed1
Au0.632
Energy-20.7
Binding len22
Me-5.771
Phylopstem-0.14262500000000003
Phylopflank0.5297250000000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure