Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCTTACGAAAAGCGGCTGTAC
.(((((((((..(((((((((&)).)))))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142574
GeneSymbolIMPDH1
Binding site1635,1658
Score0.846
Seed1
Au0.382
Energy-22.3
Binding len23
Me-9.965
Phylopstem4.7352437
Phylopflank5.1552670375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure