Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCTCCTCAGCTGCAGT
(((((((((.((..(.((((.&))))).)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142574
GeneSymbolIMPDH1
Binding site2279,2298
Score0.923
Seed1
Au0.471
Energy-21.3
Binding len19
Me-7.559
Phylopstem0.8011111111111112
Phylopflank1.5159375000000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure