Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTAATCGTAGCTCAAA
(((.(((((((((((.((((.&)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142577
GeneSymbolZNF780A
Binding site925,944
Score0.846
Seed0
Au0.618
Energy-20.5
Binding len19
Me-7.203
Phylopstem-0.808522090909091
Phylopflank-0.8901333025
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure