Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGGACAGCCTCAGACCAGGGGAGGAAGACGAAGGGATGCAGCTGCT
..((((((((((((...((((&.))))..)))).....................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142617
GeneSymbolSTRA6
Binding site2010,2058
Score1.0
Seed1
Au0.412
Energy-21.6
Binding len41
Me-5.925
Phylopstem3.041115466666667
Phylopflank2.7291373112499997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure