Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGGACAGCCTCAGACCAGGGGAGGAAGACGAAGGGATGCAGCTGCT
..((((((((((((...((((&.))))..)))).....................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142619
GeneSymbolSTRA6
Binding site1983,2031
Score1.0
Seed1
Au0.412
Energy-21.6
Binding len41
Me-5.925
Phylopstem3.1754951818181816
Phylopflank3.24004314
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure