Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCAGCTGCGT
.((((((((((((........&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142628
GeneSymbolSEC61A2
Binding site1335,1348
Score0.923
Seed1
Au0.456
Energy-23.5
Binding len13
Me-5.619
Phylopstem5.592113666666667
Phylopflank5.244212933749999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure