Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACTGCAGACCGCACTGCT
..((((.((((((((((.(((&)))..))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142643
GeneSymbolCASKIN2
Binding site3071,3092
Score0.846
Seed0
Au0.324
Energy-21.5
Binding len21
Me-6.501
Phylopstem-0.19811690909090907
Phylopflank1.10037945
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure