Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&GCGTGCCGGAAAAGTGAC
.....(((((((((((((((.&))))))))))..))))).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_001142644
GeneSymbolSPHKAP
Binding site3587,3605
Score0.846
Seed0
Au0.412
Energy-18.5
Binding len18
Me-13.666
Phylopstem2.2524016823529416
Phylopflank3.100868389999999
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure