Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGTGCCGTGGCTGTC
..(((((((((((.....(((&)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142644
GeneSymbolSPHKAP
Binding site1781,1799
Score1.0
Seed1
Au0.426
Energy-20.2
Binding len18
Me-6.782
Phylopstem4.1721272727272725
Phylopflank1.78501594625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure