Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCTGGGGCCTCAGCTGCC
..(((((((.((((.((.(((&)))..)).)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142646
GeneSymbolTPRA1
Binding site1149,1170
Score0.846
Seed1
Au0.309
Energy-21.4
Binding len21
Me-6.935
Phylopstem-0.7093495428571428
Phylopflank-0.29603308024999997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure