Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGTTGTGGCA
.....((((((((((((((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142648
GeneSymbolSAR1A
Binding site1415,1432
Score0.846
Seed0
Au0.471
Energy-20.2
Binding len17
Me-13.666
Phylopstem0.09070862500000001
Phylopflank0.07606227499999998
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure