Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATACTGCAGGTGCAT
.((((.((((((((((.....&))).))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142648
GeneSymbolSAR1A
Binding site1680,1697
Score0.846
Seed0
Au0.544
Energy-20.1
Binding len17
Me-5.694
Phylopstem-0.029826389090909098
Phylopflank0.2595283205000001
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end3
Position3UTR
2D Structure