Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTTGTATGCAACAGCTGCAGA
(((((((((..((...(((((&))))).....))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142648
GeneSymbolSAR1A
Binding site5775,5799
Score0.897
Seed1
Au0.574
Energy-19.2
Binding len24
Me-9.83
Phylopstem1.0768377055555556
Phylopflank2.38566357875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure