Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCATTGTGTTCAGCTGCAAG
(((((((((((((........&)))))).........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142653
GeneSymbolPTGES3L
Binding site133,156
Score0.846
Seed1
Au0.529
Energy-17.9
Binding len23
Me-5.763
Phylopstem0.10328599545454545
Phylopflank0.1035619482
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure