Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGTGGCTA
....((((((((((((.....&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142653
GeneSymbolPTGES3L
Binding site424,437
Score0.846
Seed0
Au0.5
Energy-17.4
Binding len13
Me-9.547
Phylopstem-0.3333434416666666
Phylopflank-0.17775223625000003
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure