Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCCGCGGCTTACCAAG
(((.((((((((((...((((&))))))))))))))...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142654
GeneSymbolPTGES3L
Binding site168,189
Score0.846
Seed0
Au0.456
Energy-20.5
Binding len21
Me-7.938
Phylopstem-0.0562141
Phylopflank0.20454475097499997
Longest consecutive pairings14
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure