Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGTCTGGCTGCAGCTGA
...((((((((((((...(((&)))....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142675
GeneSymbolCHID1
Binding site464,484
Score1.0
Seed0
Au0.441
Energy-20.2
Binding len20
Me-6.748
Phylopstem-0.5716335
Phylopflank-0.36027596999999995
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure