Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCGGGCCGTACAGTCTGTGCTGCAAT
(((((((((((((((((((((&))))))))).)))))........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001366704
GeneSymbolMAS1
Binding site10076,10107
Score0.923
Seed1
Au0.456
Energy-23.7
Binding len31
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings22
Pairings in 3prime end8
Position3UTR
2D Structure