Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTAACGGCTACTCAAAGCCACTTAGAAAACAGGAAGCAGCAGCTGCAGC
((((((((((.(((.......&.))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142683
GeneSymbolCCDC121
Binding site1379,1429
Score1.0
Seed1
Au0.515
Energy-20.4
Binding len16
Me-7.731
Phylopstem0.32688221999999995
Phylopflank0.17730421750000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure