Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTTGTTCGTTCCGCGCAGCCGCAGCC
.....(((((((((((..((.&.))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142684
GeneSymbolZMYM5
Binding site68,96
Score0.923
Seed0
Au0.324
Energy-24.3
Binding len17
Me-13.666
Phylopstem0.13576343636363636
Phylopflank0.8433789412499998
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure