Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCGCAGTTGG
...(((((((((((((.....&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142730
GeneSymbolKCTD1
Binding site2877,2891
Score0.923
Seed0
Au0.515
Energy-23.4
Binding len14
Me-6.515
Phylopstem6.227128461538461
Phylopflank5.114221375
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure