Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTCCGCACTACTGCAGCGCGGG
((((.(((((((((((..(((&)))....)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142730
GeneSymbolKCTD1
Binding site153,178
Score0.846
Seed0
Au0.265
Energy-20.0
Binding len25
Me-8.057
Phylopstem4.021157692307693
Phylopflank3.11666261625
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure