Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACAACTGAAGAGGCAAA
((((..((.((((((((((..&)))))))))).))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142763
GeneSymbolPCDH15
Binding site5231,5251
Score0.846
Seed0
Au0.588
Energy-20.7
Binding len20
Me-11.014
Phylopstem4.79469903
Phylopflank3.4811181750000006
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure