Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACCAGCAGCTGA
...((((((((((.((.....&)).))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142770
GeneSymbolPCDH15
Binding site4971,4986
Score0.846
Seed0
Au0.559
Energy-17.7
Binding len15
Me-7.371
Phylopstem2.9329847363636365
Phylopflank3.9819041750000004
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure