Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGCAACCGTAGGTTGG
...(((((((((((((((...&)))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142771
GeneSymbolPCDH15
Binding site8363,8380
Score0.808
Seed0
Au0.618
Energy-19.9
Binding len17
Me-6.515
Phylopstem4.971480125
Phylopflank4.3958103812500005
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end5
Position3UTR
2D Structure