Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCCAGGCCAGTCTGGGCACCCTGGGATAGCGGCTGCAGC
((((((((((.(((.((.(((&.))).)).))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142777
GeneSymbolHSD3B7
Binding site51,92
Score0.923
Seed1
Au0.338
Energy-23.8
Binding len23
Me-7.498
Phylopstem-0.4266281
Phylopflank-0.16030976624999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure