Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATGAACACCTGCACATCAGTTGCTGCCCTGGGTGCCAGGG
.((((((((.((..((((....&.))))..)).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001142854
GeneSymbolSPATC1L
Binding site536,577
Score0.923
Seed1
Au0.397
Energy-21.1
Binding len19
Me-7.182
Phylopstem2.3397215
Phylopflank1.0182190712499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure