Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACATCCCGTAGCTGCC
..((((((((((.((((....&))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142854
GeneSymbolSPATC1L
Binding site763,780
Score0.923
Seed1
Au0.412
Energy-22.7
Binding len17
Me-6.246
Phylopstem0.563989867
Phylopflank1.24220946675
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure