Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTAGCACCCGGGCCAACAGCTGCGT
.(((((((((((.(((.((((&)))).))).)))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142857
GeneSymbolCLXN
Binding site929,956
Score0.846
Seed1
Au0.294
Energy-20.1
Binding len27
Me-5.082
Phylopstem0.16110747058823535
Phylopflank0.031540499999999985
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure