Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTACACTGCAGAAGAAGCAAAACTCCTTTATTAGAATTACTGCAC
.(((((((((((.((((((((&)))).))))))))))............................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142930
GeneSymbolAPI5
Binding site3113,3162
Score0.923
Seed1
Au0.632
Energy-19.1
Binding len49
Me-5.082
Phylopstem0.6084594102564103
Phylopflank1.46021657
Longest consecutive pairings10
Position of longest consecutive pairings34
Pairings in 3prime end8
Position3UTR
2D Structure