Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCTCAATGATGCCACCTGCAGCTGCC
..(((((((((((.(((....&.))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142946
GeneSymbolC11orf21
Binding site348,378
Score0.923
Seed1
Au0.338
Energy-22.0
Binding len18
Me-5.814
Phylopstem-0.050476625
Phylopflank-0.007469799249999996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure