Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATGCAGGCGTGGGTGCTGCCAGGTT
(((((((((((.((((......&.))))..))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001142966
GeneSymbolGREB1L
Binding site5003,5029
Score0.846
Seed1
Au0.485
Energy-18.8
Binding len20
Me-7.284
Phylopstem4.035422258333333
Phylopflank5.1917257150000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure