Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATTTATCAACCGCAGCTA
....(((((((((((((((((&)).)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001142966
GeneSymbolGREB1L
Binding site2286,2306
Score1.0
Seed0
Au0.603
Energy-21.4
Binding len20
Me-9.547
Phylopstem4.419902473684211
Phylopflank3.94878036375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure