Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCAGGAGGTAAACCGGGG
.(((((..(((..(((((((..&)))))))....)))..))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001143676
GeneSymbolSGK1
Binding site562,584
Score0.846
Seed0
Au0.485
Energy-18.2
Binding len22
Me-12.287
Phylopstem1.5936619714285718
Phylopflank1.9951961187499998
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end6
Position5UTR
2D Structure