Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTTTATAGCCGAAACACAGCTGA
...((((((((((((((((((&))))...)))))))).....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143677
GeneSymbolSGK1
Binding site1007,1034
Score0.923
Seed0
Au0.529
Energy-20.7
Binding len27
Me-6.515
Phylopstem4.136424307692307
Phylopflank2.9148347225
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure