Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCGGCTGCAGAGAAGGCTGGTATGTCTGCAGA
((((((((((((((((.(((.&))).))))))))))...............)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143681
GeneSymbolGSTK1
Binding site357,393
Score0.846
Seed1
Au0.441
Energy-23.2
Binding len36
Me-3.938
Phylopstem2.059666980645161
Phylopflank1.6475626158749999
Longest consecutive pairings10
Position of longest consecutive pairings22
Pairings in 3prime end6
PositionCDS
2D Structure