Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTATAAACTTGCCGGGG
.(((((((.....(((((....&)))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001143682
GeneSymbolCALCOCO1
Binding site3850,3867
Score0.846
Seed1
Au0.485
Energy-16.2
Binding len17
Me-13.553
Phylopstem2.3289275714285713
Phylopflank1.8752210375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure