Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGGATCCCTGCGATTTACGAACCCGCAGCCTGCAT
.((((((((((((((((((..&.)))))))..))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143685
GeneSymbolCES5A
Binding site349,387
Score0.923
Seed1
Au0.382
Energy-23.3
Binding len23
Me-3.793
Phylopstem-0.2911473333333333
Phylopflank0.47608139375
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure