Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAAAACAAGCTGCT
..((((((....((((((((.&))))))))....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143685
GeneSymbolCES5A
Binding site1977,1996
Score1.0
Seed1
Au0.574
Energy-21.7
Binding len19
Me-13.427
Phylopstem0.2930705
Phylopflank0.40901675000000015
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end7
Position3UTR
2D Structure