Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTTTGTGTGTGTCAGGTG
((((((((((((..........&.)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001143757
GeneSymbolLRRC27
Binding site3508,3527
Score0.923
Seed1
Au0.574
Energy-18.9
Binding len14
Me-7.052
Phylopstem-0.08856254166666666
Phylopflank-0.18112104499999998
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure