Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAATTGCATCTGCAAA
((((((.(((((((((.....&))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001143759
GeneSymbolLRRC27
Binding site321,338
Score1.0
Seed0
Au0.559
Energy-19.8
Binding len17
Me-5.481
Phylopstem1.4649705555555557
Phylopflank0.9299959148750001
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure