Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGGAGGACCGGCTAATACTGTGAATTCTTGTGTCATCGTTTGGGGTTTT
(((((((((.(((((((((((&)))))))))).)..)).............................))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001143779
GeneSymbolIFT81
Binding site2112,2165
Score0.846
Seed1
Au0.618
Energy-26.1
Binding len53
Me-5.18
Phylopstem5.333298441666667
Phylopflank1.96574305625
Longest consecutive pairings10
Position of longest consecutive pairings43
Pairings in 3prime end8
PositionCDS
2D Structure