Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCTGTGCCGGGTG
((((((((((((..........&)).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001143805
GeneSymbolBDNF
Binding site45,59
Score0.846
Seed1
Au0.5
Energy-17.1
Binding len14
Me-7.052
Phylopstem4.9038246153846154
Phylopflank4.091782612499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure