Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGTGCGATTTCATTGTGTGCTCGCGTTCGCAAGCTCCGTAGTGCAGGAAGGTG
(((((((((((((((.(((((.&.))))))))))))))))...........................)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001143810
GeneSymbolBDNF
Binding site21,76
Score0.846
Seed1
Au0.544
Energy-18.1
Binding len49
Me-4.171
Phylopstem4.393959761904763
Phylopflank3.8249704764705887
Longest consecutive pairings16
Position of longest consecutive pairings32
Pairings in 3prime end6
Position5UTR
2D Structure