Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCTGTATGTCAA
...(((((((((..((((((..&))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001143814
GeneSymbolBDNF
Binding site3483,3499
Score0.846
Seed0
Au0.632
Energy-16.7
Binding len16
Me-8.661
Phylopstem3.6289652222222224
Phylopflank3.59051952675
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure