Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCTGTATGTCAA
...(((((((((..((((((..&))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001143816
GeneSymbolBDNF
Binding site3923,3939
Score1.0
Seed0
Au0.632
Energy-16.7
Binding len16
Me-8.661
Phylopstem0.7643553222222221
Phylopflank0.1829587287499999
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure